Wir möchten hier eine Veranstaltung des ORDS-Netzwerks bewerben.
Dear all,
we invite you to a seminar on workflow management in data science, featuring two contributions:
Snakemake – Reproducible and Scalable Workflow Management
Snakemake is a Python-based workflow manager that helps you to formalize your data analysis in a reproducible, scalable, and portable way, including deployment on high-performance computing (HPC) facilities. In this session, Christiane Hassenrück, bioinformatician at the Leibniz Institute for Baltic Sea Research, Warnemünde (IOW) will introduce:
- The basics of the snakemake logic for defining workflows consisting of several interdependent analysis steps (rules)
- Software integration via Conda
- Workflow deployment on an HPC cluster
Nextflow – Flexible and Scalable Workflows for Science
Nextflow is a powerful workflow framework designed for scalability and flexibility, making it ideal for complex bioinformatics analyses. Fabian Billenkamp, a bioinformatician at the Institute for Animal Nutrition, Friedrich-Loeffler-Institut (Braunschweig), will provide an easy-to-follow introduction, covering:
- Nextflow’s core concepts and unique features
- Practical workflow examples from microbiome and transcriptome research
Date & Time: 28-March-2025, 1 pm
Location: online, https://uni-rostock-de.zoom.us/j/67548297872
If you’re looking to improve the efficiency and scalability of your data workflows, this seminar is for you! We look forward to your participation.
Your ORDS-MV organizing team